Chapter 21: Comprehensive Immune Profiling

The human immune system is an intricate network of cells, tissues, and organs that work in concert to defend our bodies against threats. Mass cytometry has revolutionized our ability to map this complex system with unprecedented detail. Let’s explore how this technology is reshaping our understanding of immune variation, novel cell subsets, and age-related changes.

Mapping the Human Immune System

The quest to map the human immune system in its entirety is akin to creating a detailed atlas of a vast, unexplored continent. Mass cytometry has provided us with the tools to embark on this ambitious journey.

A seminal paper by Brodin and Davis (2017) in Nature Reviews Immunology, “Human immune system variation,” laid the groundwork for understanding the complexity and variability of the human immune system. They highlighted the importance of comprehensive immune profiling in understanding health and disease.

Carr, E.J., et al. (2016) published a study in Nature Immunology titled “The cellular composition of the human immune system is shaped by age and cohabitation.” This work used mass cytometry to profile the immune systems of 670 individuals aged 2 to 86 years old.

The researchers found that the variability in immune cell frequencies between individuals was influenced by both age and environmental factors. Notably, they discovered that cohabitation had a significant impact on immune profiles, with adults who lived together showing more similar immune cell frequencies compared to individuals living apart.

This study demonstrates how mass cytometry can be used to comprehensively profile immune system composition across a large number of individuals, revealing insights into how both intrinsic factors like age and extrinsic factors like cohabitation shape immune variation.

Identifying Novel Immune Cell Subsets

The high-dimensional nature of mass cytometry data has allowed researchers to uncover previously unknown immune cell subsets, reshaping our understanding of immune function.

A groundbreaking study by Villani et al. (2017) in Science, cited over 2200 times, “Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors,” combined mass cytometry with single-cell RNA sequencing to identify new subsets of dendritic cells and monocytes. This work has had profound implications for our understanding of innate immunity and antigen presentation.

Atlas of human blood dendritic cells and monocytes

Restricted content

You must be logged in and have a valid subscription to see this content. Please visit our subscription page for more info. If you are already a VIP member, be sure you are logged in with the same email address you made your purchase.

Imagine my surprise when I stumbled upon the study by Carr et al. (2016) in Nature Immunology, titled "Cohabitation is associated with a greater resemblance of the human gut microbiome and immune system." These researchers discovered that people living together - couples, families, roommates - actually have immune systems that start to mimic each other over time. It's like our cells are having their own little house parties and swapping notes. This isn't just a quirky fact; it's mind-blowing science. Using single-cell data, they showed that our immune profiles shift to become more similar to those we live with. It's as if our bodies are playing an elaborate game of "immune system charades," and winning means becoming more like your housemates. So next time you're annoyed at your roommate for leaving dishes in the sink, just remember: your immune cells might be best friends.

Scroll to Top